The symptoms in the upper parts of the plants cannot be recognized in early stages of root infection.

Signs of damage

Diagnosis of this disease is difficult and laborious because infected roots in the soil can only be detected by digging up the soil and observing the roots by eye, trapping mycelia around the infected roots by the bait twig method

How to prevent

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Sordariomycetes

If your plant is not getting enough light, the most common sign is the yellowing and dropping of leaves, stunted leaf growth, elongated stems, and a dull-green color. If your plant is getting too much light, then its leaves will have singed tips, burned patches, or will be falling off (yikes!).

You can prevent this from happening by turning the plant once a week or every time you water. This ensure all leaves are exposed to roughly the same amount of light. All plants will bend towards their light source, and we recommend turning all your houseplants at least once a week to prevent “one-sided” growth.

Most plants will survive illuminance ten times lower than listed below but will not grow as well or bloom. Most plants grown as houseplants are selected because they are already adapted to growing at typical house temperatures, between 15° and 25°C. Exceptions do occur, and some plants require chilling periods at lower temperatures (down to 5° or 10°) in winter when less light is available. Houseplants are generally grown in specialized soils called potting compost or potting soil, not in local natural soil. A good potting compost mixture includes soil conditioners to provide the plant with nutrients, support, adequate drainage, and proper aeration. Most potting composts contain a combination of peat and vermiculite or perlite. Concern over environmental damage to peat bogs, however, is leading to the replacement of peat by coir (coconut fibre), which is a sustainable resource. Sterilised soil can also be used.

Treat

Lack of light

Mosaic symptoms are variable but commonly include irregular leaf mottling (light and dark green or yellow patches or streaks). Leaves are commonly stunted, curled, or puckered; veins may be lighter than normal or banded with dark green or yellow.

Remove all infected plants and destroy them. Do NOT put them in the compost pile, as the virus may persist in infected plant matter. Monitor the rest of your plants closely, especially those that were located near infected plants.
Disinfect gardening tools after every use.

Control measures are the use of resistant varieties, the destruction of resistant vectors and weeds - pathogen reserves, removal of diseased plants and plant debris, crop rotation, sterilization of tools for plant care.

Mosaic virus (general)

Yellowing and shrivelling of lower leaves. Some or all of the plant suddenly wilts, especially in hot weather. Plants may recover in cooler or wetter conditions. Brown or black streaks in the tissue under the bark. These are visible as a circle or part-circle of brown marks, if the stem is cut across transversely, or as brown lines if it is cut lengthways. In woody plants the marks are often in the outer (most recent) growth ring, although older infections that were not fatal may have left similar marks in older, inner growth rings. However, a few plants, such as chrysanthemums and roses, don't usually show these marks when infected. Branch dieback is a common symptom in trees and shrubs. Sometimes only part of the plant may wilt and dead branches may indicate infections which occurred in previous years.

Water the plant regularly, and when possible, provide afternoon shade. Fertilize on schedule, using a low-nitrogen, high-phosphorus fertilizer. Prune off dead and dying branches. You can often get rid of the verticillium wilt fungus in the soil by solarization.

There is no effective treatment for verticillium wilt. For affected vegetables, remove and dispose of the plant; don't compost it. For landscape plants, prune out affected branches and dispose of them immediately. Do not use infected wood for chips for landscape mulch.

Verticillium wilt

The earliest symptoms of rose rosette disease include a red pigmentation of the underside of leaf veins followed by sharply increased growth of vegetative shoots, which are typically more succulent than normal and colored in various shades of red. Leaves often become deformed, crinkled, and brittle with yellow mosaics and red pigmentation. As the disease progresses, leaves become very small, petioles are shortened, and most lateral buds grow, producing short, intensely red shoots. The disease causes the plant to be exceptionally susceptible to freeze damage. Symptoms on cultivated roses are typically less severe than on multiflora rose. Cultivated roses show symptoms of thickened, succulent stems and a proliferation of thorns. Symptoms can mimic some forms of herbicide damage.

Prune your roses in late winter or early spring. Do not use leaf blowers around your roses. Protect roses from prevailing winds with walls or other plants. Give your roses plenty of space. Control multiflora rose in your area.

1. Remove ornamental roses with symptoms. The entire plant including the roots should be removed and destroyed by burning or placing in a plastic bag. Care must be taken when working with diseased plants as you can facilitate spread of the mites that spreads the disease. Bag the plant before removal, cut it at ground level and then dig out the plant’s roots. Soil need not be removed. Clean tools and put on fresh clothing before moving to a disease-free plant or area. 2. Plant ornamental roses as far away as possible from known stands of multiflora rose. The general recommendation is maintain at least 300 feet between your roses and any stands of multiflora rose. Even greater distance is preferred especially if they are upwind of your desirable rose plants. 3. Control the disease by controlling the mite. Start mite control early by pruning your roses hard in late winter (back by 2/3) to remove as many overwintering mites as possible and then spray with horticultural oil to kill any remaining mites. Organic pesticides such as horticultural oils and insecticidal soap are recommended over other pesticides as these organic pesticides are less harmful to natural predators that feed on the problem mites. Apply weekly  during the months of June and July paying particular attention to the new growing tips where the mites will congregate. Refrain from using leaf blowers around roses as they can spread mites. 4. Help to isolate your roses. Do not plant roses too close together. With extra space between the plants mite movement can be reduced. Also, consider interplanting roses with other ornamental plants. 5. Using rose rosette disease as an IPM strategy. The multiflora rose is an exotic invasive species that is responsible for the degradation of millions of acres of farmland and recreational areas. Using the disease to control this invasive weed can cut costs and be considered environmentally friendly for reducing the amount of synthetic chemicals used. However, the disease also affects cultivated roses. One should be extremely cautious and good neighbor-minded when it comes to rose rosette disease.

Rose rosette disease

Stems will be leggy or stretched out. Leaves turn yellow. Leaves are too small.

Arrange the light sources so that the plant receives the required number of photons.

Make sure your plant gets not too much/not too little light.

Light-related issue

Common, Persian, Chinese, and Japanese lilac leaves develop round to irregularly shaped brown spots with yellow halos. These spots enlarge and blight entire leaves. Succulent twigs are girdled, killed, and turn black.

1. Exclusion or eradication of the pathogen (quarantine and use of pathogen-tested seeds and propagated materials)
2. Use of clean transplants.
3. Monitor crops regularly and use predictive models.
4. Reduce the pathogen levels by crop rotation.
5. Remove weeds and incorporate crop residues that can host the disease.

The most common strategy for controlling diseases caused by Pseudomonas syringae is, as it has been for more than 5 decades, to spray bactericides. These mainly include a variety of copper compounds or other heavy metals, with or without various combinations of fungicides or other pest-control chemicals.

Pseudomonas

- Black or dark brown, superficial fungal growth on the aerial parts of plants, particularly the upper leaf surfaces
- The amount of growth can vary from a fine soot-like or powdery deposit, to a thick sheet of growth that may crack or peel away from the leaf surface during dry conditions
- The growth can sometimes be washed away, leaving a healthy-looking leaf surface beneath
- Sap-sucking pests such as aphids, scale insects, mealybugs or whiteflies can often be found on the plant, above the point where the sooty mould is growing
- In some cases these insects may occur on plants that overhang those affected with sooty mould
- Ants may also be seen in association with the sap-sucking pests
- Leaves, stems, fruit, etc. where the sooty moulds are growing are contaminated with sticky honeydew

It isn’t really possible to preventively treat against sooty mold, and when it appears it is immediately recognizable.
There are a few things to do that can reduce the likeliness that this disease would appear.
- Ensure your plant has sufficient nutrients and is well watered. A plant weakened by poor soil or lack of water is a vulnerable plant.
- Increase the diversity of plants and flowers in your garden, it is the best way to protect them naturally from their predators.

Sooty mold grows on the honeydew dropped by many sap-feeding insects (most commonly aphids, scale and whiteflies). The honeydew is a sugary liquid that the insects excrete as waste. Sooty mold in itself does not feed on plant tissues or cause damage, but it can block enough sunlight to affect photosynthesis which can weaken the plant over time. It is also very ugly and difficult remove (more on that in a bit).
The first step is to identify and treat the insect causing the problem:
- Soft or armored scale (look like small turtle shells affixed to the stems and/or leaves, sometimes very well-camouflaged in color or texture. Egg sacs are often wispy and white),
- Aphids (small green, yellow or tan insects with thin legs & antennae, wooly aphids look a bit like tiny sheep)
- Whitefly (tiny, white-winged flies).
A population of insects large enough to cause a sooty mold problem is usually pretty easy to spot and identify. Controlling the insects will stop the rain of sugar water that feeds the sooty mold.
The mold itself is difficult to remove, but you can hasten the rate at which it naturally weathers off. Spraying the leaves with insecticidal soap can help soften the sooty coating. Spray late in the day so the soap remains moist for as long as possible. If you can spray a few hours before a heavy rain is forecast the rain will be better able to remove the sooty mold.
If the plant has a rugged leaf, like holly or gardenia, you can follow the soap application with a strong jet of water from your garden hose after you’ve given the soap a little time to soften the mold. Be careful with softer-leafed plants and new growth, as a strong water stream can tear or bruise leaves. You’ll probably have to repeat the process a few times to wear the coating of sooty mold off over time.
If your insect eradication was successful, you’ll see that new growth on the sooty mold affected plants will remain fresh and clean. The mold does not spread without the honeydew to grow on, so new sooty mold indicates a continuing insect problem.

Sooty Mold

Wilting, stunting, uneven plant growth, crown rot, plant death. Roots are discolored, the cortex may slough off, leaving the vascular cylinder.

Fertilize carefully with a slow-release formula in summer months. Water long and sparingly (no more than once a week), early in the day. This way, grass blades have a chance to dry out before nightfall. Aerate the soil to prevent thatch buildup and to loosen compacted, poorly draining soil.

For warm-season Pythium diseases, time fungicide applications preventively or at the very first onset of disease symptoms.

Pythium diseases

Ascomycetes are characterized by septate hyphae with simple pores. Asexual reproduction by conidia. Sexual reproduction by ascospores, typically eight, in an ascus. Asci are often housed in a fruiting body or ascocarp e.g. cleistothecia or perithecia.

Good gardening habits and effective treatment help prevent, stop and control fungal disease: 

1. Start by planting healthy stock. ...
2. Choose planting sites based on plant needs. ...
3. Avoid overhead watering. ...
4. Water early in the day. ...
5. Don't crowd plants. ...
6. Don't work a wet garden. ...
7. Treat with a trusted, proven fungicide.

To control fungal outbreaks, as with bacteria, remove all infected plant parts, or plants. You may also choose to apply a fungicide. There are many products available for treatment, organically (copper, sulfur, and baking soda are common) or synthetically.

Ascomycetes

Fungus gnat damage will appear similar to that of any other root-related issue, such as root rot. Lower leaves may turn yellow and drop, and the plant’s growth may slow down or stop completely. In particularly bad cases, wilting of the entire plant could occur, followed by the death of the plant if roots are extremely damaged. 
In small numbers, fungus gnats are more of an annoyance than anything. In fact, the adult gnats don’t actively harm plants nor people. If their population gets out of hand, however, the larvae may start feeding on plant roots, causing notable damage. This is especially bad for young plants, such as seedlings, which have only a few delicate roots. Fungus gnats are also capable of spreading the plant pathogen that causes damping off and the eventual death of seedlings.

1. Keep soil dry: Fungus gnats seek out moist soil, so allowing your houseplants to dry out a bit between waterings can slow down or stop an infestation. Let the top inch or two of soil dry out before watering again, and try to go as long as possible between waterings. Gnats may be deterred from laying their eggs if the soil is dry on the surface.
2. Mosquito dunks (with beneficial bacteria): Mosquito dunks are used to keep mosquito larvae from populating fountains, animal troughs, fish ponds, and other small bodies of water. The product consists of a dry pellet containing a type of bacteria called Bacillus thuringiensis subspecies isrealensis. This beneficial bacteria infects and kills the larvae of flying insects, including mosquitoes, fruit flies, and fungus gnats.
To use mosquito dunks: Fill up a gallon jug (or watering can) with clean water and toss in a mosquito dunk. It’s a good idea to break up the dunk a bit before placing it in the water, or you can wait for it to soften before breaking it apart. Let the dunk soak in the water for as long as possible (at least overnight), then remove it from the water (the dunk can be reused) and use this water for fungus gnat–infested plants. The bacteria will have leeched into the water and will now infect and kill any larvae that come into contact with it in the soil. Repeat this process every time you water your plants for at least a few months.
3. Cover drainage holes: Though gnats typically remain near the tops of pots, they may find their way to the drainage holes on the underside of a pot and start laying eggs there, too. If this happens, cover the drainage holes with a piece of synthetic fabric to prevent the gnats from getting in or out of the hole, but to also let water pass through freely. Attach with tape or rubber bands.

Getting rid of fungus gnats is all about consistency. Catching the adults is fairly easy, but because the adult population comes in cycles, you need to make sure that your traps are refreshed regularly. For the best results, use a combination of the traps :
1. Sticky cards traps: These traps consist of a yellow note card covered in a sticky adhesive. They are most effective when cut into small squares and placed directly on top of the soil or attached to skewers just above the soil. Adult gnats will fly or crawl onto the card and become trapped. Fungus gnats are attracted to the color yellow, so use the yellow sticky cards rather than the blue ones. 
2. Cider-vinegar traps: Simple and effective, cider-vinegar traps consist of a shallow container with a small amount of apple cider vinegar, water, and liquid dish soap.
To make a cider-vinegar trap: Find a shallow container—a tuna can is perfect—and fill it with equal parts water and apple cider vinegar. (The liquid should be at least ¼-inch deep.) Put a few drops of liquid dish soap into the mixture and stir gently. Place the trap near the base of the affected plant or, ideally, inside the pot on top of the soil. Check it every few days to refresh with new vinegar and water.
3.Flypaper: Flypaper ribbons, such as those hung in horse barns to catch outdoor flies, can also be used to catch fungus gnats. However, these traps are usually overkill for gnats and can easily get stuck to things you don’t want them to stick to, such as furniture, hair, plants, and so on.

Fungus Gnats

Symptoms of Phytophthora diseases are not restricted to root rots because some species attack only aboveground parts of the plant. Large necrotic leaf or stem blotches characterize late blight of potato and tomato. Under the leaf, along the leading edge of the necrotic tissue, a downy, white growth may develop. Defoliation and a dieback starting at branch tips characterize holly tip blight. Rhododendrons develop a leaf spot and blight in winter caused by P. syringae. Crabapple or flowering pear nursery stock can develop a black, sunken canker several inches above the soil due to the same organism.

The most effective way of preventing Phytophthora rot diseases is to provide good drainage and to practice good water management. Along with the appropriate cultural controls, the fungicide fosetyl-al (Aliette) may be used on a number of ornamental plant species to help prevent Phytophthora infections.

High temperatures have been used to control Phytophthora in many ways. Steam heat is effective to kill Phytophthora in contaminated soil, media or on planting containers such as pots. If you re-use pots you can soak pre-cleaned pots in hot (180°F) water for at least 30 min or use aerated steam (140°F) for 30 min.

Phytophthora

The signs of damage vary, typically depending on the way that the insect feeds on the plant. Damage from insects with chewing mouthparts typically appears on leaves or stems as ragged edges, holes, or other missing tissue. Insects that often cause chewing damage include caterpillars and Eastern lubber grasshoppers.

Preventing the transmission of viruses can be the chief reason to control certain insects. An example is the importance of controlling western flower thrips when growing impatiens. Their transmission of tomato spotted wilt virus can devastate a crop being started in a greenhouse.

The most common way of damaging the crops is through direct injury, caused by feeding on above-ground and below-ground plant parts. This type of direct crop injury is related to the insect's mouthparts. For example, insects with chewing mouthparts, such as beetles, damage the crop by chewing the leaves or some other plant parts. Moreover, some of them cause damage by boring into the plant tissue, such as stem boring insects or leaf miners.

Feeding damage by insects

Symptoms vary across plant organs and tissues. B. cinerea is a soft rot that will have a collapsed and water soaked appearance on soft fruit and leaves. Brown lesions may develop slowly on undeveloped fruit. Twigs infected with gray mold will die back. Blossoms will cause fruit drop and injury, such as ridging on developing and mature fruit. Symptoms are visible at wound sites where the fungus begins to rot the plant. Gray masses with a velvety appearance are conidia on the plant tissues are a sign of plant pathogen. These conidia are asexual spores that will continue to infect the plant and surrounding hosts throughout the growing season making this a polycyclic disease. Plants can produce localized lesions when a pathogen attacks. An oxidative burst causes hypersensitive cell death called a hypersensitive response (HR). This soft rot can trigger HR to assist in colonization. Botrytis cinerea, as a necrotrophic pathogen, exploits the dead tissue for its pathogenicity or its ability to cause disease. Susceptible plants cannot use the HR to protect against Botrytis cinerea.

The best way to prevent gray mold is to space out plants so they have room to dry out after rain or watering. Remove infected flowers, leaves and stems. Infected plant parts should be buried or composted. Many flowering plants can recover from gray mold when warm, dry conditions return.

Prune or stake plants to improve air circulation between plants. · If growing indoors use a small clip-on fan to improve air flow.

Gray mold

The leaves become narrower and longer, and with severe damage, the plants become chlorotic and die.

There is no cure for nectria canker, so it is important to take steps to prevent it affecting young and vulnerable trees. Pruning injuries can be a major source of infection, so avoid pruning trees in the fall, especially in wet conditions. Restrict pruning to dry weather and remove any branches or stems that have been infected with the fungus.

Freezing damage is another important way in which trees get infected. For young transplants, providing protection from freezing can prevent the disease. Avoid other types of injury and keep your trees healthy to minimize the risks from nectria infection. This means being careful with the lawnmower around trees, preventing or managing pests, and providing adequate water and nutrients.

Nectriaceae

Mealybugs have needle-like sucking mouthparts. Feeding activity can cause a yellowing of host leaves, distorted growth, premature leaf drop, and, with heavy populations, plant death. Mealybugs also produce large amounts of a sweet, sticky liquid waste product called honeydew. A black fungus called sooty mold may grow on the honeydew.

This pest is usually brought into the interiorscape on an infested plant. Therefore, one of the best ways to manage mealybugs on houseplants is to carefully check plants being considered for purchase and reject any infested plants. Quarantine new plants for 7-10 days in an isolated spot, and check for signs of mealybugs or other household pests before adding the plants to your interiorscape.
Provide proper cultural control so that the plants are vigorous and can tolerate moderate mealybug feeding without suffering too much damage. Do not over-water or over-fertilise — mealybugs are attracted to plants with high nitrogen levels and soft growth. Removing overwintering sites, such as loose bark, can help to reduce mealybug numbers. Predatory insects, such as lacewings, syrphid flies, ladybirds, and several small parasitic wasps, prey on outdoor mealybugs and can often keep their numbers down. An introduced beetle, Cryptolaemus montrouzieri, the mealybug destroyer, is available commercially for release in greenhouses. Avoid the unnecessary use of insecticide to minimise any adverse effect on these beneficial insects. Manage ants, which are attracted to honeydew produced by the mealybugs and will inhibit the activities of natural enemies.

1 Wash them away: Mealybugs can be dislodged with a steady stream of water. Repeat the treatment as necessary. This is best for light infestations.
2 Insecticidal soap: Insecticidal soaps are available on the market, or you can make your own by using a dish detergent such as Ivory Liquid. Try to find a product free of perfumes and additives that might harm plants. Mix the soap in a weak concentration with water (starting a 1 teaspoon per gallon and increasing as necessary). Spray on plants.
3 Neem oil: Neem oil is derived from the neem tree. Use according to label instructions. In addition to its insecticidal properties, neem is also a fungicide and has systemic benefits (meaning the plant absorbs it so it can control insects it doesn't directly contact). According to the Environmental Protection Association, neem is safe for use on vegetables and food plants as well as ornamentals.
4 Kitchen insect spray: This all-purpose insect spray. To make a batch, combine 1 garlic bulb, 1 small onion, and 1 teaspoon of cayenne pepper in a food processor or blender and process into a paste. Mix into 1 quart of water and steep for 1 hour. Strain through a cheesecloth and add 1 tablespoon of liquid dish soap. Mix well. The mixture can be stored for up to 1 week in the refrigerator.

Mealybug Pests

Cucurbits infected with tospovirus exhibit a variety of symptoms. Leaves can show bronzing to severe systemic chlorotic spotting. Other symptoms include leaf deformation, mosaic, die-back and overall plant stunting. Fruit symptoms can range from chlorotic ring spots on young fruit to necrotic lesions on older fruit.

Keep the greenhouse free of weeds inside and around the outside, since both thrips and tospoviruses are easily harbored in greenhouse weeds. When new cuttings or plugs arrive, check them for thrips or virus symptoms immediately. You can also employ virus indicator plants in the greenhouse.

Infected plants cannot be cured. Control measures aim to prevent or reduce the levels of disease in crops by removing or avoiding sources of virus infection and minimising spread by thrips.

Tospovirus

A sign of plant disease is physical evidence of the pathogen. For example, fungal fruiting bodies are a sign of disease. When you look at powdery mildew on a lilac leaf, you’re actually looking at the parasitic fungal disease organism itself (Microsphaera alni). Bacterial canker of stone fruits causes gummosis, a bacterial exudate emerging from the cankers. The thick, liquid exudate is primarily composed of bacteria and is a sign of the disease, although the canker itself is composed of plant tissue and is a symptom.

Good gardening habits and effective treatment help prevent, stop and control fungal disease
1. Start by planting healthy stock. 
2. Choose planting sites based on plant needs. 
3. Avoid overhead watering. 
4. Water early in the day. 
5. Don't crowd plants. 
6. Don't work a wet garden. 
7. Treat with a trusted, proven fungicide.

Baking soda, soap, and water is one of the safer ways to treat plant fungus issues, especially if the affected plants are inside your home. You really don't want to be spraying fungicide all over the inside of your home if you can avoid it!

Fungi

Primary symptoms of infection include wilting leaves, blight of young shoots, sunken and darkened areas of stems with possible sap or resin flow, cankering on larger stems and branches, browning of the vascular tissue when bark is scraped away, and canopy dieback.

Avoid planting sites prone to spring frosts and use fertilization, irrigation, and weed control practices that discourage late-season growth and promote early hardening off. Sprays for mummy berry and botrytis may help, particularly during flowering.

Prune and discard all blighted stems and cankered branches from the canopy. For trees with thin bark and dense canopies (e.g. Japanese maple and kousa dogwood), annual sanitation pruning of dead stems, especially on interior canopy branches, can help to avoid disease outbreaks in the future.

Phomopsis cankers and blights

Symptoms begin as oval to elongate lesions that are generally reddish-brown in color. In the late stages of the disease, erumpent pustules produce numerous black sooty spores. Severe infestations with many stem lesions may weaken plant stems and result in lodging.

Since the fungus overwinters on other plant material, clean up dead plants at the end of the season. Rotate your allium crops to areas that were not previously hosting plants in the family. Remove wild forms of allium, which can also host the fungal spores.

The rust species Puccinia obtegens has shown some promise for controlling Canada thistle, but it must be used in conjunction with other control measures to be effective.

Puccinia

General symptoms on the solanaceous crops and cucurbits include seed rot and seedling blight which discolors the roots and causes seedlings to topple over. Preemergence and postemergence damping-off are also possible symptoms that may occur.

Avoid overhead watering that can produce surface runoff, and consider slow drip irrigation instead. Hardy Phytophthora blight pathogens will survive in both hot summer and cold winter compost piles. Remove infected plants immediately, bag and dispose of infected debris, and always keep your garden clean.

Crop rotation may reduce the number of pathogens in the soil and, "a minimum of a 3 years crop rotation which alternates with non-host species is recommended to avoid build-up of P. capsici spores." Crops should also avoid conditions that would be conducive to the pathogen by using well drained soils and raised beds. As stated above, "Excess moisture is the single most important component to the initial infection and subsequent spreading of Phytophthora capsici. Overall, a study by K.H. Lamour and M.K. Hausbeck found that "crop rotation and mefenoxam are not likely to provide economic control". Mefenoxem is the active enantiomer contained in the racemic fungicide metalaxyl used to defend against Phytophthora capsici. Sexual recombination provides the genetic diversity to promote resistance towards fungicides in P. capsici. The failure of crop rotation as a means to control P. capsici may also be due to weeds playing the role of an alternative host in the absence of common hosts. According to a study done by the University of Florida, "In Florida, and perhaps elsewhere, weeds may contribute to pathogen survival in the absence of a host crop or when propagules may not readily survive in soil or plant debris." To avoid fruit rot of vegetable crops in the Cucurbitaceae, trellising cucurbit fruits and other ways to keep the fruit off the ground is a way to control secondary inoculants (zoospores) from physically being splashed from the soil onto the fruit. Control of Phytophthora capsici is easier in drier climates with less rainfall such as California. In these areas, it is important to practice placing drip irrigation emitters away from the stems of pepper plants in order to reduce the incidence of crown rot in peppers.

Phytophthora blight

A diagnostic feature of this disease is the presence of many dark-brown, pimple-like structures called pycnidia (fruiting bodies of the fungus) that are readily visible in the tan centers of the spots. When spots are numerous, affected leaves turn yellow and eventually shrivel up, brown, and drop off.

Use disease-free seed. There's no evidence that this fungus is carried by seeds, but err on the safe side and don't save seed from infected plants. Thoroughly processing the tomato seeds you are saving will also help rid the seeds of lingering diseases.
Start with a clean garden. Dispose of all affected plants. The fungus can over-winter on the debris of diseased plants. It's important to dispose of all the affected plants far away from the garden and the compost pile. Keep in mind that it may have spread to your potatoes and eggplants, too.
Avoid overhead watering. Water aids the spread of Septoria leaf spot. Keep it off the leaves as much as possible by watering at the base of the plant only. Of course, it's impossible to keep the rain off your plants, but every little bit helps.
Provide room for air circulation. Leave some space between your tomato plants so there is good airflow. Stake them so that they are not touching the ground and not all bunched together. Good air circulation is especially important during damp and rainy periods.
Mulch below the plants. A layer of mulch will help prevent spores on the ground from splashing up onto the lower leaves.
Plant next year's tomatoes in a different section of your garden. In small gardens, it's not always practical to rotate your crops, so good clean up and sanitation become even more important.

Removing infected leaves. Remove infected leaves immediately, and be sure to wash your hands and pruners thoroughly before working with uninfected plants.
Consider organic fungicide options. Fungicides containing either copper or potassium bicarbonate will help prevent the spreading of the disease. Begin spraying as soon as the first symptoms appear and follow the label directions for continued management.
Consider chemical fungicides. While chemical options are not ideal, they may be the only option for controlling advanced infections. One of the least toxic and most effective is chlorothalonil (sold under the names Fungonil and Daconil).

Septoria leaf spot

The first sign of powdery mildew is pale yellow leaf spots. White powdery spots can form on both upper and lower leaf surfaces, and quickly expand into large blotches. The large blotches can cover entire leaf, petiole and stem surfaces. When powdery mildew infects the majority of the foliage, the plant weakens and the fruit ripens prematurely.

Control is possible with triadimefon and propiconazole. It is also possible with hexaconazole, myclobutanil, and penconazole.

Standard fungicides are an effective way to manage powdery mildew disease on plants. Spray programs of conventional fungicides are advised to begin when powdery mildew symptoms and signs are first noticed. Conventional fungicides should be applied on a regular basis for best results against the disease.

Powdery mildew

Spider mites damage foliage by sucking juices from the leaves. This shows up as stippling on the leaves and more severe damage can result in leaf bronzing that may lead to leaf drop. Leaf drop increases incidence of sun/light burn and negatively affects both vegetative and flowering stages. 
Additional signs of spider mites are curled and/or burned leaf edges as well as leaves that have taken on a leathery texture. Webbing will be produced when mite populations grow in size and can be found on foliage, twigs and fruit/buds.

Look before you buy:
Inspect indoor and outdoor plants before purchasing to make sure they aren’t infested.
Keep plants healthy:
Make sure plants are well-watered and fertilized. Healthy plants are more able to withstand pests and diseases, while weakened or stressed plants are more susceptible to problems.
Keep the area clean:
Clear weeds and debris out of garden areas where pests can more easily hide.
Bump up moisture levels:
Since spider mites thrive in dry conditions, keep air humidity levels higher around plants.
Use high-quality soil:
Use a high-quality, sterile potting soil to avoid possible soil-borne pests.

Chemical pesticide use actually encourages the spread of spider mites by killing the beneficial insects that prey on them. Mites are also known to develop quick resistance to various pesticides. For these reasons, it’s important to control mites with effective natural and organic methods.
1 Prune leaves, stems and other infested parts of plants well past any webbing and discard in trash (and not in compost piles). Don’t be hesitant to pull entire plants to prevent the mites spreading to its neighbors.
2 Wash plants with a strong stream of water and reduce pest numbers.
3 Commercially available beneficial insects, such as ladybugs, lacewing and predatory mites are important natural enemies. For best results, make releases when pest levels are low to medium.
4 Nuke Em, a relatively new organic insecticide containing food-grade ingredients, works fast and kills most indoor gardening pests at the egg, larvae or adult stage. Best of all, it does this without leaving a residue on the leaves that can impact flavor.
5 BotaniGard ES is a highly effective biological insecticide containing Beauveria bassiana, an entomopathogenic fungus that attacks a long-list of troublesome crop pests – even resistant strains! Weekly applications can prevent insect population explosions and provide protection equal to or better than conventional chemical pesticides.
6 Mix Pure Neem Oil with Coco-Wet and apply every 3-5 days to kill pest eggs indoors and interrupt the reproductive cycle. Make sure to spray all plant parts, including the undersides of leaves. Do NOT apply when temperatures exceed 90˚F and wait at last six hours before turning lights on.
7 If populations are high, use a least-toxic, short-lived pesticide (Take Down Spray, Doktor Doom Foggers) to reduce infestations, then release predatory mites to maintain control.
8 Insecticidal soap or botanical insecticides can be used to spot treat heavily infested areas.
9 On fruit trees, horticultural oil should be applied early in the season or late in the fall to destroy overwintering eggs.
10 Dust on leaves, branches and fruit encourages mites. A mid-season hosing (or two!) to remove dust from trees is a worthwhile preventative.
11 Water stress makes both trees and garden plants more susceptible to mite infestations. Make sure your plants are properly watered.

Spider Mites

Phyllosticta causes circular leaf spots with brown/reddish borders. The spots can be really large covering a large area of the leaf. Initial symptoms include small watersoaked regions on the leaves. lesions become more apparent with a ring-like pattern at alter stages.

Repeated applications of fungicides such as Dithane M45, Captan, Ferbam, Mancozeb or thiophanate-methylbased treatments will help control infection levels and can prevent new infections in healthy plants, but it is difficult if not impossible to completely eradicate the fungus in an infected host plant.

Remove and dispose of affected leaves from infected plants to keep the fungal spores from spreading into the growing environment. Some growers have reported covering the mature lesions with clear nail polish to prevent the dissemination of spores.

Phyllosticta leaf spots

Plant stunting and severe curling of leaves occur when the leafhopper Empoasca fabae punctures the undersurfaces of leaves and veins of bush beans and inhibits growth. This leafhopper also feeds on alfalfa and causes leaves to turn yellow and drop off.

Try to avoid moisture or humidity relationships as they affect the habitats of homopterans.

When controlling thrips, you can prune and get rid of any injured areas on the plant. Regular pruning helps get rid of thrips. Thrips on flowers can be eliminated as soon as you see signs of damage by using a mild insecticide like insecticidal soap or neem oil, or by pruning the flowers.

Homoptera

Uneven swelling and maturation of the drupe, as well as premature staining without enlargement.

Neem oil as a preventative or light-infection treatment. Copper fungicides or phosphorus acid fungicides can treat larger scale infections. Prevention is the best cure.

Planting resistant cultivars. Treating with hot water on Roses cuttings can be effective, the water must be 44 degrees and treated for 15 minutes.

Peronosporaceae

Canker, plant disease, caused by numerous species of fungi and bacteria, that occurs primarily on woody species. Symptoms include round-to-irregular sunken, swollen, flattened, cracked, discoloured, or dead areas on the stems (canes), twigs, limbs, or trunk.

Control includes removing diseased parts in dry weather; growing adapted or resistant varieties in warm well-drained fertile soil; avoiding overcrowding, overwatering, and mechanical wounds; treating bark and wood injuries promptly; controlling insect and rodent disease carriers; wrapping young trees to prevent.

The main measures for controlling the residue are the destruction of vegetation after harvest; cutting and burning of plant parts most severely damaged by anthracnose; spraying with 1% Bordeaux liquid.

Canker

Initially spots of limited size, slightly concave, appear at the peduncular scar of some fruits, or near growth cracks or various wounds. They gradually spread with a fairly typical dark brown to black colour. The lesions decay further while their perimeter is clearly identified. They eventually cover a large proportion of ripe or unripe fruits if the environmental conditions are favourable. Whatever their development stage, the fruits undergo internal rot extending to the seeds. Brown to black globular structures, pycnidia, can be observed in the damaged tissues. They are spherical and irregularly shaped, ostiolate, and contain many hyaline and unicellular conidia, containing two lipid droplets.

Dothideomycetes

Young seedlings develop a rot at the crown. Later, the tissue becomes soft and constricted, and the plants wilt and fall over.

Tool Sterilization. Prune Damaged Foliage. Plant Resistant Vareities. Crop Rotation. Keep The Soil From Being Soggy. But Don't Let It Get Too Dry. Sow Seeds The Right Way. Airflow Helps.

Once fusarium wilt infects a plant, there is no effective treatment. Remove and dispose of affected plants immediately; don't compost this garden refuse. Whenever possible, remove and replace fusarium-infected garden soil.

Fusarium wilts, blights, rots and damping-off

Black mold is characterized by obvious lesions that appear on the surface of ripe fruit. Lesions are light to dark brown and vary from small flecks affecting only epidermal tissue to large, more or less circular, sunken lesions with decay extending into the carpel wall and often into the seed locule. During warm, humid weather the fungus may sporulate to form a black, velvetlike layer on the surface of the sunken lesions.

Select resistant varieties of plants/crops that are less susceptible to important pathogens. Pathogens reproduce at higher rates on susceptible varieties compared with resistant or partially resistant varieties. Cultural practices grapeCapitalize on cultural practices to reduce the pathogen population or create conditions less favorable for the pathogen to develop. When fewer non-chemical control methods (such as sanitation) are used, resistance is more likely to develop, or will develop more rapidly. Monitor and maintain agronomic factors such as soil moisture and crop nutrition, and manage other pests, to avoid crop stress throughout the season.Inadequate or excessive fertilization with nitrogen may increase disease incidence in some crops.  For example, early blight of potato and tomato and dollar spot of turfgrass are favored by nitrogen deficiency.  Alternatively, the severity of spring dead spot of bermudagrass and some foliar diseases of wheat is increased with intensive nitrogen fertilization. Excessive irrigation or frequent irrigation with small amounts of water increases the incidence of many diseases by promoting spread of the pathogen and extending periods of leaf wetness, and high soil moisture. Rotate crops to allow greater flexibility in choosing different tillage practices and/or the use of fungicides with different MOAs. Be aware that applying a fungicide unnecessarily to a crop in one year in the absence of fungus could result in undesirable effects on pathogens of rotational crops. NOTE: It is possible to rotate different crops between years and, yet, still use the same fungicide MOA to control the same disease. When one crop can serve as a source of inoculum for a subsequent crop, the alternation scheme among at-risk fungicides should be continued between successive crops such that the first at-risk fungicide applied to a crop belongs to a different group than the last at-risk fungicide applied to the previous crop.Be aware that resistant plant pathogens can spread from nearby fields, highways, railroads, or utility rights-of-way areas near your farm or treated site. Local and regional cooperation in resistance management is essential. Participate in Extension programs that conduct area-wide monitoring for the presence of disease pathogens and potential resistance development. Submit reports of fungicide control failures so that the possibility of resistance can be monitored and evaluated.

Fungicides are pesticides that kill or prevent the growth of fungi and their spores. They can be used to control fungi that damage plants, including rusts, mildews and blights. They might also be used to control mold and mildew in other settings.

Alternaria black molds and stem cankers

The first symptom is usually the appearance of minute yellow stippling on the upper surface of leaves that have mites on the undersides. Infested leaves generally become yellow and may drop off from plants. Red spider mites on the back of a leaf (left) and mite damage on a cucurbit leaf (right).

Host plant resistance can be a valuable component of an IPM system that is compatible with other control measures such as chemical control, and it makes beneficial natural enemies more effective. In many cases, even partially resistant cultivars are useful to enhance the efficacy of biocontrol agents.

Insecticidal soap or botanical insecticides can be used to spot treat heavily infested areas. On fruit trees, horticultural oil should be applied early in the season or late in the fall to destroy overwintering eggs. Dust on leaves, branches and fruit encourages mites.

Tetranychidae

Botryosphaeria obtusa enters the fruit through wounds. These can be made by insects, birds or growth cracks. At first a brown spot, near the calyx, appears on the fruit. The spot on the fruit then enlarges and black/brown rings appear on the fruit. The fruit holds its shape, however, unlike other fruit diseases. The fruit will then wither up and can remain on the tree for another year before falling off. During this time pycnidia appear on the surface of the rotted fruit.

Start with clean seed. In warm, humid weather, a single infected seed in as many as 10,000 could lead to a black rot outbreak.

The most effective treatment is to prune out the infected areas on trees, to ensure transfer between trees does not occur. Fruit that is infected can stay on the tree for over a year, and therefore remaining fruit should be removed to avoid another source of inoculation for other trees. The trimmed branches or dead fruit should then be burned or disposed of immediately as the organism can survive on the dead tissue for a long period of time. Infection of leaves and fruit can be avoided by spraying them with a fungicide. The treatment for the fungicide should be also kept up to date via the manufacturer's instructions.

Black rot

The pathogen causes angular chlorotic lesions on the foliage. These lesions appear angular because they are bound by leaf veins. During humid conditions, inspection of the underside of the leaf reveals gray-brown to purplish-black fungal growth. This downy material is the sporulation of the pathogen. Magnification of the sporulation reveals the acutely and dichotomously branched sporangiophores bearing lemon-shaped sporangia. Eventually, leaves will turn necrotic and curl upwards. The disease is sometimes called wildfire because of how rapidly it progresses, as if the crop were burned by fire. Symptoms on watermelon and cantaloupe are different from on other cucurbits; leaf spots are typically not angular and turn brown to black in color. Often, an exaggerated upward leaf-curling will occur. Regardless of which cucurbit is involved, only the leaves are infected, not fruit, flowers, stems or roots. Disease of the leaves results in three major effects: 1. reduced yields, 2. a greater proportion of misshapen fruit, especially in cucumber, and 3. sunscalded fruit, due to increased exposure to direct sunlight, especially in watermelon and winter squash.

Early detection of downy mildew and immediate or preventative fungicide application is imperative for the control of this disease. A forecasting system exists to assist growers in timing their fungicide applications for maximum benefit. The system tracks outbreaks of the disease and provides a forecast or risk assessment for future outbreaks.

Resistant cultivars - Host resistance is an important tool in disease control and should be used whenever possible. Cultivars resistant to downy mildew have been developed for cucumber and cantaloupe and to a lesser extent for squash and pumpkin. Although cucumber downy mildew has been severe on resistant cultivars, these cultivars are more effective than susceptible cultivars in delaying infection. Chemical control - Chemical control is highly recommended because downy mildew is an aggressive and destructive disease and satisfactory control without the use of fungicides is unlikely. Both protectant and systemic products should be applied. Fungicides are most effective when applied prior to infection and reapplied at 5- to 7-day intervals. The following products have proven to be the most effective fungicides in cucumber downy mildew control in North Carolina trials conducted annually from 2004 to 2008: Presidio (fluopicolide, Valent), Ranman (cyazofamid, FMC), Previcur Flex (propamocarb, Bayer), Curzate (cymoxanil, DuPont), Tanos (famoxadone and cymoxanil, DuPont), and Gavel (zoxamide and mancozeb, Dow AgroSciences). These products should be applied in a program to prevent pathogen resistance, that is, rotated with fungicides of a different mode of action. Protectant fungicides such as chlorothalonil and mancozeb should be used as mixing partners. Вiological control - Although many biological control products have been evaluated for their ability to control downy mildew, none have proven effective and are not recommended for use.

Cucurbit downy mildew

Loss of chlorophyll, with the resulting yellowing of the leaves is the most obvious sign of senescence and in some cases, as seen in Figure 1a and c, the additional synthesis of anthocyanins during senescence results in dramatic orange, red and even purple coloration.

Leaf senescence occurs when the leaf is no longer of use to the plant. It is a normal aging process.

Senescence

Mealybugs damage crops in a variety of ways. Pupae and females drink the sap of the plant, slowing growth and causing deformation and yellowing of the leaves, sometimes with subsequent leaf fall. The overall effect is a weakening of photosynthesis and hence a decrease in yield.

To keep mealybugs at bay, spray your plants once a week with a solution of neem oil in water. If you coat all plant surfaces, the neem oil will slow or stop feeding on your plants by a wide variety of pests. In addition, the oil coats any eggs or crawlers and will smother them.

Pyrethroids such as permethrin, bifenthrin or cyfluthrin can be used to control mealybugs. Some gardeners use Green Lacewing (Chrysopidae) larvae to control mealybug infestations, as the larval Lacewings are voracious predators of aphids and other small insects.

Pseudococcidae

Whiteflies tend to prefer to feed on new growth, so check around any newly unfurled leaves first.
Check the undersides of leaves—especially around the veins—for white insects, even if they aren’t immediately visible, and feel leaf surfaces for sticky honeydew. If the whiteflies are feeding, they’ll suddenly all fly off the leaves in a swarm, so it’s very obvious.
You may also find eggs laid on the undersides of leaves. This is the beginning of a new generation! When the eggs hatch, the larvae will look like teeny white ovals without legs; they don’t move but they immediately start sucking the plant juice. This is why gardeners often miss whiteflies until it’s too late. Adult females can produce up to 400 eggs, which hatch in about one week to a month after laying. They are usually laid in a circular pattern. Eggs are pale yellow when newly laid and brown when about to hatch.

1 Your first line of defense should be inspecting all plants for pests before you bring them home, as well as keeping any new additions away from the rest of your plants for a period of time. This will allow you to identify and curtail any pest or disease issues that appear.
2 Keeping natural predators around will prevent whiteflies from ever exploding in population. For this reason, avoid using insecticides. Ladybugs, spiders, green lacewing larvae, and dragonflies are a few of many beneficial insects that can control a whitefly population. Hummingbirds are another natural predator. Try creating a habitat that will attract dragonflies and damselflies (which also helpfully eat mosquitoes) or beautiful hummingbirds.
3 When it comes to whiteflies, avoid chemical insecticides; they’re usually resistant and all you end up doing is killing the beneficial insects—their natural predators—and the insects that pollinate the garden for a better harvest!
4 Mulch early in the season with aluminum reflective mulch, especially around tomatoes and peppers. The reflective mulch makes it challenging for whiteflies to find their preferred host plants. 
5 Set out yellow index cards coated with petroleum jelly to monitor whiteflies, especially when it comes to tomatoes, peppers, sweet potatoes, or cabbage crops. A half-and-half mixture of petroleum jelly and dish soap, spread over small boards painted bright yellow, is sticky enough to catch little whiteflies, too. To whiteflies, the color yellow looks like a mass of new foliage. The bugs are attracted to the cards, get stuck in the jelly, and die.

To control whiteflies, there are various solutions and traps that you can use. The biggest tip is: start early! In the mornings and evenings, as you wander the garden or tend to your houseplants, check the back of the leaves for eggs or notice when little bugs “fly away” as you approach your plants.
- Always start with blasting whiteflies (as with aphids and many other insect pests) with your watering hose or a spray bottle. This will cause them to scatter and will dislodge nymphs and eggs to some extent.
- Consider spraying your plants’ leaves with an insecticidal soap, following the directions on the packaging. Be sure to spray the undersides of leaves, too. Follow up 2 or 3 times, as necessary. 
Spray plants in the evening when temperatures are cooler, as mid-day heat may cause an adverse reaction in your plant. Plus, spraying in the evening allows you to avoid accidentally spraying any pollinators or beneficial insects.
- According to the National Gardening Association, the following simple homemade mixture should be helpful to control and deter whiteflies: Use a mix of dish soap and water. A good squirt of soap to a gallon of water should work. As mentioned above, only spray in cooler temperatures; late in the day is best. The NGA mixture is a pretty benign combination, and whiteflies are nearly impossible to get rid of, so it’s best to try more preventative tactics first, as mentioned below.
- If all else fails and your whitefly population is persistent, you can (carefully) use a handheld vacuum every few days to remove them from your plants. This gets rid of both nymphs and adults. Just be sure NOT to empty your vacuum into a trash can inside your home afterward

Whiteflies

These insects are so small (a few millimeters in length), that winds can transport them for fairly long distances. They are often green, but might be red or brown, as well. They move quite slowly and cannot jump or hop. Aphids excrete a sugary liquid called honeydew, because the plant sap from which they feed contains excess carbohydrates relative to its low protein content. To satisfy their protein needs, they absorb large amounts of sap and excrete the excess carbohydrates. Honeydew is used as food by ants, honeybees, and many other insects.

Monitor your plants. Beginning early in the season, check your plants frequently for the presence of aphids, paying close attention to plants you've found aphids on before.

Neem oil, insecticidal soaps, and horticultural oils are effective against aphids. Be sure to follow the application instructions provided on the packaging. You can often get rid of aphids by wiping or spraying the leaves of the plant with a mild solution of water and a few drops of dish soap.

Aphididae

Southern blight on plants is most likely to occur in the summer months when the soil is warm and moist. Symptoms include discolored lower leaves, wilted foliage, and plant collapse and it usually results in the death of the plant.

Preventing entry of the pathogen. Use of healthy, certified seeds of known origin. Careful cleaning of agricultural tools. Avoiding environmental conditions that favour development of the pathogen. Irrigation management. Plant density and growth habitats.

Soil solarization and certain organic amendments (e.g. composted chicken manure and rye-vetch green manure), as well as introducing certain Trichoderma spp. have also been shown to reduce plant death and number of sclerotia produced in the field in tomatoes. In addition to these cultural methods, chemical methods (e.g. fungicides) can also be employed.These methods all disrupt the production of mycelium and sclerotia, thus reducing the spread of disease.

Southern blight

As a general rule, common symptoms of a bad root knot nematode infestation can include chlorosis (yellowing of the leaves/stems), stunted growth, wilting, and a lack of production of fruit.
However, these may be nonexistent to severe depending on the population of nematodes, the health of the plant, the natural resistance of the plant, and any number of other factors in the soil makeup. It can also be hard to separate the symptoms from other pest/disease issues.
The only real way to be sure that it is in fact root knot nematodes is to carefully remove a plant from the soil and examine its roots. If there are a lot of galls growing along the root system, it’s likely root knot nematodes at work.
While these microscopic nematode parasites can be problematic, root knot nematodes are not uncontrollable. They may be tricky, but with good garden management, you won’t have negative consequences!

Prevention is always the best cure for a pest problem, and root knot nematodes are no exception. So let’s talk about prevention.
First off, plant nematode-resistant varieties. There are a wide variety of different seed suppliers who carry nematode-resistant seed stock, usually notated as an N in the resistance charts.
If you cannot plant nematode-resistant strains, practice good crop rotation. Some species of root knot nematodes are more selective than others. Planting cover crops like marigolds or sudangrass between at-risk crops will also bring down the nematode population.
Remove the roots of old plants when clearing the bed. As root knot nematode juveniles can live in the galls they form on the roots, they will continue to multiply even as the roots are dying out. Removing the remaining root mass can extract those juveniles.
Till the soil 2-3 times in the fall. This breaks up the soil, turning the nematodes up to the surface where they will die off from exposure to the sunlight. This will impact both beneficial and parasitic nematodes, so you may need to re-add beneficial nematodes again in the spring.
Plant overwintering grass cover crops like wheatgrass, ryegrass, or rye. Sudangrass is also good and offers some nematicide properties. Keep these mowed down to a manageable level, and till them under in the spring to add more plant matter to the soil.
Regularly add more organic material to your soil. Adding more composted leaves, grass clippings, and manure to your beds will help naturally control the population of nematodes in the soil, since nematodes prefer living material to decaying plant matter.

There are two organic nematicide variants available: ones based on geraniol (the oil of geraniums), and ones based on quillaja saponaria, the soap bark root. Remember, though, that nematicides will kill off both beneficial and parasitic nematodes.
Quillaja saponaria compounds such as Monterey Nematode Control use the saponins from the soap bark tree to help reduce nematode populations.
You can also use an azdirachtin product such as AzaMax, which is a pure azdirachtin extracted from neem oil. This may work as a light nematicide, but tends to be better against other pests such as spider mites, thrips, aphids, and more.
Add neem seed meal, crab meal, or oyster shell flour to your soil. All three are fertilizers, but they’re great soil builders in the war against root knot nematodes.
Neem seed meal is a gentle fertilizer which is made from the leftover material after making neem oil. It helps reduce a number of pests naturally, plus it breaks down to add low levels of nitrogen to the soil. It also can help strengthen the roots of plants to make them resistant.
Crab meal encourages beneficial soil microorganisms which reduce nematode population. It also helps plants to increase the strength of their cell walls, making them more naturally resistant to many conditions.
Oyster shell flour is in essence a form of diatomaceous earth. While it has less effect when it’s wet, it can help make the soil less hospitable to nematode populations and reduce other pests as well.
Black walnut leaves and hulls have a natural compound in them which is called juglone. This compound is an extremely effective killer of root knot nematodes, but can have an adverse effect on some plants. That’s why there’s few weeds around walnut trees!
If you want to put an organic source of juglone to work in your garden, use fresh walnut leaves or smashed hulls as a thick layer of compost on your bed, or just build a tall pile there. Regularly turn it to keep it composting. I use leaves, as they’re quick to break down.
The juglone compounds will seep into the soil when you wet down the pile, and after three to six months should have broken down enough that they will no longer be toxic to other plants. This also helps wipe out weeds or other pests that may be in your beds during composting.

Root-knot Nematodes

Phytoplasmas can infect and cause various symptoms in more than 700 plant species. One characteristic symptom is abnormal floral organ development including phyllody, (i.e., the production of leaf-like structures in place of flowers) and virescence (i.e., the development of green flowers attributable to a loss of pigment by petal cells). Phytoplasma-harboring flowering plants may nevertheless be sterile. The expression of genes involved in maintaining the apical meristem or in the development of floral organs is altered in the morphologically affected floral organs of phytoplasma-infected plants. A phytoplasma infection often triggers leaf yellowing, probably due to the presence of phytoplasma cells in phloem, which can affect phloem function and carbohydrate transport, inhibit chlorophyll biosynthesis, and trigger chlorophyll breakdown. These symptoms may be attributable to stress caused by the infection rather than a specific pathogenetic process. Many phytoplasma-infected plants develop a bushy or "witch's broom" appearance due to changes in their normal growth patterns. Most plants exhibit apical dominance but infection can trigger the proliferation of axillary (side) shoots and a reduction in internode size. Such symptoms are actually useful in the commercial production of poinsettias. Infection triggers more axillary shoot production; the poinsettia plants thus produce more than a single flower.

Phytoplasmas are normally controlled by the breeding and planting of disease-resistant crop varieties (perhaps the most economically viable option) and by the control of insect vectors.

Plantibodies targeting phytoplasmas have also been developed. Tetracyclines are bacteriostatic to phytoplasmas.However, disease symptoms reappear in the absence of continuous antibiotic application. Thus, tetracycline is not a viable agricultural control agent, but it is used to protect ornamental coconut trees.

Phytoplasma

Symptoms first appear as a slight yellowing of foliage and wilting of upper leaves. As wilting progresses, leaves may turn dull-green to brown and remain attached to the plant. When the stem and roots are cut diagonally, reddish-brown streaks are visible in the vascular tissues.
Signs and symptoms:
- Initially, plants wilt during the hottest part of the day and recover at night.
- Leaflets turn yellow on one side of the plant, or even just leaflets on one half of a compound leaf.
- The entire plant soon turns yellow and wilts. Browning of leaves occurs rarely.
- Peel the epidermis off the lower stem to see dark red and brown discolored vascular tissue.

Fusarium is most prevalent in warm soils. It is harbored in old plant debris and soil. The best way to prevent infection in your crops or plants is rotation and sterilization. 
Never plant the same crop in the same place annually. 
Pots should be sterilized with a bleach solution and new soil used when reusing them. You can also solarize beds, by spreading black plastic over an area in full sun for a month to kill the fungus. This causes extreme high temperatures that will “cook” the fungus and provide good control of Fusarium. 
Wash off tillage equipment, shoes and other tools that might have encountered infected soil. Remove all old plant debris annually and if you think it might be contaminated, burn it. Do not compost contaminated material as this provides an ideal incubation condition for propagating the fungus.

1 Plant resistant varieties when available.
2 Remove stricken growth from the garden and sterilize pruning clippers (one part bleach to 4 parts water) between cuts.
3 Use fumigants to control many garden insects, like cucumber beetles, which are known to spread the disease.
4 High nitrogen fertilizers may increase susceptibility to the disease. Test your soil and use a slow-release, organic fertilizer in the vegetable garden.
5 Hand pull or spot treat weeds using a weed flamer or natural herbicide — many weed species host the disease pathogen.
6 Mycostop is a biological fungicide that will safely protect crops against wilt caused by Fusarium. Approved for use in organic crop production, it can be applied as a soil spray or drench (1-2 gm/ 100 sq ft) to seedlings, ornamentals and vegetables. Apply sufficient water during application to move Mycostop into the root zone.
7 If the disease persists, it is best to remove the entire plant and solarize the soil before planting again.
To solarize the soil, you must leave a clear plastic tarp on the soil surface for 4-6 weeks during the hottest part of the year. Soil solarization will reduce or eliminate many soil inhabiting pests including nematodes, fungi, insects, weeds and weed seeds.

Fusarium Wilt

Typical symptoms of potassium deficiency in plants include brown scorching and curling of leaf tips as well as chlorosis (yellowing) between leaf veins. Purple spots may also appear on the leaf undersides. Plant growth, root development, and seed and fruit development are usually reduced in potassium-deficient plants. Often, potassium deficiency symptoms first appear on older (lower) leaves because potassium is a mobile nutrient, meaning that a plant can allocate potassium to younger leaves when it is K deficient. Deficient plants may be more prone to frost damage and disease, and their symptoms can often be confused with wind scorch or drought. The deficiency is most common in several important fruit and vegetable crops; notably potatoes, brassicas, tomatoes, apples, currants, gooseberries, and raspberries. Sugar beets, cereals, and clover are also commonly affected.

The best way to prevent or solve this deficiency, is to add a potassium fertilizer to the plant. If necessary, it can be added to the nutritional feeding schedule if the shortage keeps occurring.

The most widely used potassium fertilizer is potassium chloride (muriate of potash). Other inorganic potassium fertilizers include potassium nitrate, potassium sulfate, and monopotassium phosphate. Potassium-rich treatments suitable for organic farming include feeding with home-made comfrey liquid, adding seaweed meal, vermiculite, composted bracken, and compost rich in decayed banana peels. Wood ash also has high potassium content but must be used cautiously due its effect on pH level. Adequate moisture is necessary for effective potassium uptake; low soil water reduces K uptake by plant roots. Liming acidic soils can increase potassium retention in some soils by reducing leaching; practices that increase soil organic matter can also increase potassium retention.

Potassium deficiency

Plants infected by chrysanthemum white rust exhibit spots on the upper surfaces of leaves. These spots are initially pale-green to yellow in color and up to 5mm in diameter, but may turn brown as the tissue becomes necrotic. On the underside of the leaf, the spots develop into pink or white pustules that become prominent as the teliospores develop.

Buy cuttings from a reliable source. Inspect them when they come in and regularly thereafter for symptoms of white rust. Water with drip tapes or individual emitters if possible to avoid splashing spread via overhead irrigation.

Keep susceptible cultivars isolated. Pick off and burn affected leaves. Use cuttings from healthy plants only. Remove plant debris and escaped plants. Keep humidity low, and avoid wetting foliage.

Chrysanthemum white rust

A range of lesions can occur including concentric oblong light oval-shaped rings (early sign), light green diamond-shaped areas, concentric green and tan oval-shaped rings, tan necrotic spots, and green islands within tan necrotic spots. Damage can reduce harvest yield and grade of onions.

Reduced bulb size and quality of symptoms develop while bulbs are still growing. Control thrips. Control weeds and volunteer onion plants. Remove and destroy infected plants.

Monitor thrips populations with sticky traps starting in June. Damage is often first noticed at field edges, in areas of stressed plants, or in locations with thin plant stands. Infected plants may not show symptoms for several weeks. Sometimes symptoms may never appear. Reduced bulb size and quality of symptoms develop while bulbs are still growing. Control thrips. Control weeds and volunteer onion plants. Remove and destroy infected plants. Rotate crops.

Iris yellow spot virus

Leaf curl and distortion. Leaf yellowing or stippling. Necrotic leaf spots. White sporulation of the pathogen on lower leaf surface. Defoliation.

Use hygiene measures. Start clean, remove crop residues and prevent splashing water.

One way to control downy mildew is to eliminate moisture and humidity around the impacted plants. Watering from below, such as with a drip system, and improve air circulation through selective pruning. In enclosed environments, like in the house or in a greenhouse, reducing the humidity will help as well.

Peronosporea

Rust diseases come in different varieties and can affect a wide range of plants. People often struggle with rust on their roses. It is easy to remember the defining characteristics of this fungus, as they match its name. Rust plant disease will look similar to the rust that appears on that old bicycle in the shed.
- Look for yellow or white spots forming on the upper leaves of a plant.
- Look for reddish to orange blister-like swellings called pustules on the undersides of leaves.
- Orange or yellow spots or streaks appear on the undersides of the leaves.
- Within these spots that form are spores.
- Usually leaf distortion and defoliation occur.

- Dust your plants with sulfur early in the season to prevent infection or to keep mild infections from spreading.
- Space your plants properly to encourage good air circulation.
- Avoid wetting the leaves when watering plants.
- There are many effective rust fungicides you can try.

1 Select rust-resistant plant varieties when available.
2 Pick off and destroy infected leaves and frequently rake under plants to remove all fallen debris.
3 Water in the early morning hours — avoiding overhead sprinklers — to give plants time to dry out during the day. Drip irrigation and soaker hoses can be used to help keep leaves dry.
4 Use a slow-release, organic fertilizer on crops and avoid excess nitrogen. Soft, leafy, new growth is most susceptible.
5 Apply copper sprays or sulfur powders to prevent infection of susceptible plants. For best results, apply early or at first sign of disease. Spray all plant parts thoroughly and repeat every 7-10 days up to the day of harvest.
6 Effectively treat fungal diseases with SERENADE Garden. This broad spectrum bio-fungicide uses a patented strain of Bacillus subtilis and is approved for organic gardening. Best of all, it’s safe to use — you can treat and pick crops the same day!
7 Containing sulfur and pyrethrins, Bonide® Orchard Spray is a safe, one-hit concentrate for insect attacks and fungal problems. For best results, apply as a protective spray (2.5 oz/ gallon) early in the season. If disease, insects or wet weather are present, mix 5 oz in one gallon of water. Thoroughly spray all parts of the plant, especially new shoots.
8 Prune or stake plants and remove weeds to improve air circulation. Make sure to disinfect your pruning tools (one part bleach to 4 parts water) after each cut.
9 Use a thick layer of mulch or organic compost to cover the soil after you have raked and cleaned it well. Mulch will prevent the disease spores from splashing back up onto the leaves. Burn or bag infected plants after the growing season . Do NOT compost.

Leaf Rust

On the apple tree, the infections occur on leaves, fruit and young twigs. The brightly colored spots produced on the leaves make it easy to identify. Small, pale yellow spots appear on the upper surfaces of the leaves, usually during late April or May on the eastern seaboard of the United States. These spots gradually enlarge and turn orange or red and may show concentric rings of color. Drops of orange liquid may be visible on the spots. Later in the season, black dots appear on the orange spots on the upper leaf surface. In late summer, tube-like structures develop on the undersurface of the apple leaf. Infected leaves sometimes drop prematurely, particularly during drought conditions or when the tree is under additional stress. Infections on fruit are usually near the blossom end and are somewhat similar to the leaf lesions. On the eastern red cedar host, the fungus produces reddish-brown galls from 1⁄4–1 inch (6.4–25.4 mm) in diameter. These galls can be mistaken for cone structures by the uninitiated. After reaching a diameter of about 1⁄2 inch (13 mm), they show many small circular depressions. In the center of each depression is a small, pimple-like structure. In the spring these structures elongate into orange gelatinous protrusions or horns. The spore-bearing horns swell during rainy periods in April and May. The wind carries the microscopic spores to infect apple leaves, fruit and young twigs on trees within a radius of several miles of the infected tree. On other species of juniper more common in landscaping and bonsai, the sizes of the infections are reduced. Early in the infection, the galls are small bumps on the woody portions of the plant. They maintain the orange gelatinous form after the first warm rains of spring but generally on a greatly reduced scale.

Fungicide sprays applied in a timely manner are highly effective against the rust diseases during the apple cycle. Most sprays are applied four times at 7- to 10-day intervals, starting with pink bud on crabapples. These applications are to protect the apples from spores being released from the cedar host in mid-spring. If cedar apple rust disease is diagnosed on apple fruits and leaves it is far too late to spray. Systemic fungicides are available. Fungicides listed for use on apples can be used in July and August on the cedars to reduce infection. Application of fungicides to the junipers before and while they are in the infectious orange gelatinous state seems to reduce the severity of the outbreak.

Because apples are an economically important crop, control is usually focused there. Interruption of the disease cycle is the only effective method for control of the cedar apple rust. The recommended method of control is to “remove cedars located within a 1 mile (1.6 km) radius” of the apples to interrupt the disease cycle, though this method is seldom practical. For those doing bonsai, it is common to have the trees within feet of each other and on the central eastern seaboard of the United States, Eastern Red Cedar is a common first-growth conifer along roadsides.

Cedar-apple rust

Rhizoctonia solani can cause seed rot, root rot and lesions on hypocotyls. Damping-off occurs when germinating seedlings are infected prior to emergence. Reddish-brown, sunken lesions form on hypocotyls of young seedlings.

Planting seedlings in warmer soil and getting plants to emerge quickly helps minimize damage. Crop rotation also helps minimize the amount of inoculum that results in infection. A few resistant varieties with moderate resistance to Rhizoctonia can be used, but they produce lower yields and quantity than standard varieties. Minimizing soil compaction helps water infiltration, drainage, and aeration for the plants.

There is no cure for plants that already have damping off.

Rhizoctonia damping-off, blight and rot

The term “abiotic disorders” refers to a wide array of plant problems. We use the word “abiotic” to indicate that the symptom is not caused by a biological agent such as an insect, mite or pathogen.

Examine where symptoms first appear on a plant—on new leaves, old leaves or all over? Note the pattern of any discolouration or yellowing—is it all over, between the veins or around the edges? If only the veins are yellow, deficiency is probably not involved. Note general patterns rather than looking at Individual plants—are the symptoms distributed throughout a group of plants of the same type growing together? In the case of a deficiency all of the plants should be similarly effected, although distribution will depend on past treatments applied to the soil. Soil analysis, such as determining pH, can help to confirm the presence of physiological disorders. Considering recent conditions, such as heavy rains, dry spells, frosts, etc., may also help to determine the cause of plant disorders.

Lollipop Plant

(Pachystachys lutea)

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